Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm15703-201ENSMUST00000120250 880 ntBASIC10.45□□□□□ -0.74
Col8a2P25318 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm25700-201ENSMUST00000177693 110 ntBASIC10.45□□□□□ -0.74
Col8a2P25318 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Col8a2P25318 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.45□□□□□ -0.74
Col8a2P25318 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.45□□□□□ -0.74
Col8a2P25318 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
Col8a2P25318 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.45□□□□□ -0.74
Col8a2P25318 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
Col8a2P25318 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Col8a2P25318 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Col8a2P25318 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Col8a2P25318 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.44□□□□□ -0.74
Col8a2P25318 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Gm2606-201ENSMUST00000100754 1002 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Col8a2P25318 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.44□□□□□ -0.74
Col8a2P25318 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Gm11222-201ENSMUST00000119005 738 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Gm14832-201ENSMUST00000121289 322 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Gm13570-201ENSMUST00000140763 309 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Col8a2P25318 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Gm38000-201ENSMUST00000192390 1215 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 AA914427-201ENSMUST00000193194 1166 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.44□□□□□ -0.74
Col8a2P25318 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC10.44□□□□□ -0.74
Col8a2P25318 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Gm44262-201ENSMUST00000204969 372 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC10.44□□□□□ -0.74
Col8a2P25318 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Gm9176-201ENSMUST00000219955 1120 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
Col8a2P25318 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
Col8a2P25318 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.44□□□□□ -0.74
Col8a2P25318 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.44□□□□□ -0.74
Col8a2P25318 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
Col8a2P25318 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Col8a2P25318 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Col8a2P25318 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Col8a2P25318 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.43□□□□□ -0.74
Col8a2P25318 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms