Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.1□□□□□ -0.47
Fv4P11370 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Fv4P11370 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Fv4P11370 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.1□□□□□ -0.47
Fv4P11370 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.1□□□□□ -0.47
Fv4P11370 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.1□□□□□ -0.47
Fv4P11370 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.1□□□□□ -0.47
Fv4P11370 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.1□□□□□ -0.47
Fv4P11370 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.1□□□□□ -0.47
Fv4P11370 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.1□□□□□ -0.47
Fv4P11370 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Fv4P11370 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Gm24136-201ENSMUST00000083374 165 ntBASIC12.1□□□□□ -0.47
Fv4P11370 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Gm44831-201ENSMUST00000208469 2989 ntBASIC12.1□□□□□ -0.47
Fv4P11370 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.1□□□□□ -0.47
Fv4P11370 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Fv4P11370 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.1□□□□□ -0.47
Fv4P11370 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Fv4P11370 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.09□□□□□ -0.47
Fv4P11370 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.09□□□□□ -0.47
Fv4P11370 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
Fv4P11370 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Fv4P11370 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC12.09□□□□□ -0.47
Fv4P11370 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.09□□□□□ -0.47
Fv4P11370 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.09□□□□□ -0.47
Fv4P11370 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.09□□□□□ -0.47
Fv4P11370 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.09□□□□□ -0.47
Fv4P11370 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.09□□□□□ -0.47
Fv4P11370 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Gm10268-201ENSMUST00000085340 555 ntBASIC12.09□□□□□ -0.47
Fv4P11370 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Fv4P11370 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Fv4P11370 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC12.09□□□□□ -0.47
Fv4P11370 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.09□□□□□ -0.47
Fv4P11370 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Fv4P11370 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Fv4P11370 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Fv4P11370 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms