Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.92□□□□□ -0.66
UbbP0CG49 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.92□□□□□ -0.66
UbbP0CG49 Gm43721-201ENSMUST00000199677 2313 ntBASIC10.92□□□□□ -0.66
UbbP0CG49 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
UbbP0CG49 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
UbbP0CG49 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.92□□□□□ -0.66
UbbP0CG49 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 AC160410.1-201ENSMUST00000219298 1972 ntBASIC10.92□□□□□ -0.66
UbbP0CG49 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
UbbP0CG49 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.91□□□□□ -0.66
UbbP0CG49 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.91□□□□□ -0.66
UbbP0CG49 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Gm27390-201ENSMUST00000184516 176 ntBASIC10.91□□□□□ -0.66
UbbP0CG49 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC10.91□□□□□ -0.66
UbbP0CG49 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
UbbP0CG49 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
UbbP0CG49 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC10.91□□□□□ -0.66
UbbP0CG49 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
UbbP0CG49 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Gm18983-201ENSMUST00000222884 2729 ntBASIC10.9□□□□□ -0.66
UbbP0CG49 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
UbbP0CG49 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC10.9□□□□□ -0.66
UbbP0CG49 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
UbbP0CG49 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Gm15920-201ENSMUST00000118998 402 ntBASIC10.9□□□□□ -0.66
UbbP0CG49 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
UbbP0CG49 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
UbbP0CG49 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC10.9□□□□□ -0.66
UbbP0CG49 Gm42929-201ENSMUST00000198374 1286 ntBASIC10.9□□□□□ -0.66
UbbP0CG49 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
UbbP0CG49 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.9□□□□□ -0.66
UbbP0CG49 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
UbbP0CG49 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
UbbP0CG49 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms