Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Gm42690-201ENSMUST00000197921 1836 ntBASIC8.58□□□□□ -1.04
Smim1P0C8K7 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Gm37015-201ENSMUST00000192763 1521 ntBASIC8.58□□□□□ -1.04
Smim1P0C8K7 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Gm43937-201ENSMUST00000204640 3122 ntBASIC8.58□□□□□ -1.04
Smim1P0C8K7 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Smim1P0C8K7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Gm44826-201ENSMUST00000207648 2332 ntBASIC8.57□□□□□ -1.04
Smim1P0C8K7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Gm12428-201ENSMUST00000119844 727 ntBASIC8.57□□□□□ -1.04
Smim1P0C8K7 Gm9719-201ENSMUST00000162765 543 ntBASIC8.57□□□□□ -1.04
Smim1P0C8K7 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC8.57□□□□□ -1.04
Smim1P0C8K7 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC8.57□□□□□ -1.04
Smim1P0C8K7 Gm16476-201ENSMUST00000221544 139 ntBASIC8.57□□□□□ -1.04
Smim1P0C8K7 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Cog3-203ENSMUST00000227473 4197 ntBASIC8.57□□□□□ -1.04
Smim1P0C8K7 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Gm13135-201ENSMUST00000117628 3121 ntBASIC8.57□□□□□ -1.04
Smim1P0C8K7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
Smim1P0C8K7 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 AC126262.1-201ENSMUST00000221802 1904 ntBASIC8.56□□□□□ -1.04
Smim1P0C8K7 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Gm44207-201ENSMUST00000204568 1424 ntBASIC8.56□□□□□ -1.04
Smim1P0C8K7 AC125374.1-201ENSMUST00000213573 1400 ntBASIC8.56□□□□□ -1.04
Smim1P0C8K7 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
Smim1P0C8K7 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms