Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp6P0C0A3 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Gm22018-201ENSMUST00000104357 131 ntBASIC13.67□□□□□ -0.22
Chmp6P0C0A3 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Gm18584-201ENSMUST00000203098 964 ntBASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Gm32025-201ENSMUST00000217960 307 ntBASIC13.67□□□□□ -0.22
Chmp6P0C0A3 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Mir339-201ENSMUST00000083659 96 ntBASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp6P0C0A3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Matn2-203ENSMUST00000226766 3252 ntBASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gm12291-201ENSMUST00000121627 311 ntBASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gm8738-201ENSMUST00000172606 329 ntBASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gm42693-201ENSMUST00000196779 631 ntBASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.66□□□□□ -0.22
Chmp6P0C0A3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Gm9899-201ENSMUST00000065519 555 ntBASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Chmp6P0C0A3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Gm6992-201ENSMUST00000217973 1607 ntBASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Chmp6P0C0A3 Snord83b-201ENSMUST00000104546 94 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms