Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC11.65□□□□□ -0.54
Ctla4P09793 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.65□□□□□ -0.54
Ctla4P09793 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Ctla4P09793 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ctla4P09793 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Ctla4P09793 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Ctla4P09793 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Ctla4P09793 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.65□□□□□ -0.54
Ctla4P09793 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ctla4P09793 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.55
Ctla4P09793 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Ctla4P09793 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.55
Ctla4P09793 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Ctla4P09793 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Ctla4P09793 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.64□□□□□ -0.55
Ctla4P09793 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.64□□□□□ -0.55
Ctla4P09793 Gm11222-201ENSMUST00000119005 738 ntBASIC11.64□□□□□ -0.55
Ctla4P09793 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Gm25043-201ENSMUST00000158604 212 ntBASIC11.64□□□□□ -0.55
Ctla4P09793 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC11.64□□□□□ -0.55
Ctla4P09793 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ctla4P09793 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.64□□□□□ -0.55
Ctla4P09793 Gm27023-201ENSMUST00000182372 285 ntBASIC11.64□□□□□ -0.55
Ctla4P09793 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Gm21769-201ENSMUST00000211922 111 ntBASIC11.64□□□□□ -0.55
Ctla4P09793 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.64□□□□□ -0.55
Ctla4P09793 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.64□□□□□ -0.55
Ctla4P09793 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Ctla4P09793 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Ctla4P09793 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.64□□□□□ -0.55
Ctla4P09793 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.64□□□□□ -0.55
Ctla4P09793 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Ctla4P09793 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Ctla4P09793 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Ssr1-203ENSMUST00000225246 1825 ntBASIC11.63□□□□□ -0.55
Ctla4P09793 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ctla4P09793 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Ctla4P09793 Gm24255-201ENSMUST00000104481 128 ntBASIC11.63□□□□□ -0.55
Ctla4P09793 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC11.63□□□□□ -0.55
Ctla4P09793 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Ctla4P09793 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ctla4P09793 Gm27243-201ENSMUST00000183964 521 ntBASIC11.63□□□□□ -0.55
Ctla4P09793 Gm31256-201ENSMUST00000194705 506 ntBASIC11.63□□□□□ -0.55
Ctla4P09793 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC11.63□□□□□ -0.55
Ctla4P09793 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.63□□□□□ -0.55
Ctla4P09793 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.63□□□□□ -0.55
Ctla4P09793 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.63□□□□□ -0.55
Ctla4P09793 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ctla4P09793 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Ctla4P09793 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Ctla4P09793 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.63□□□□□ -0.55
Ctla4P09793 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Ctla4P09793 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms