Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm10434-201ENSMUST00000101158 471 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 Snord83b-201ENSMUST00000104546 94 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm15370-201ENSMUST00000117158 253 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm4986-201ENSMUST00000119731 549 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Hoxd3P09027 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm38158-201ENSMUST00000194617 339 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm44421-201ENSMUST00000205064 1221 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm5904-201ENSMUST00000210286 865 ntBASIC9.92□□□□□ -0.82
Hoxd3P09027 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC9.92□□□□□ -0.82
Hoxd3P09027 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Hoxd3P09027 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Hoxd3P09027 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC9.91□□□□□ -0.82
Hoxd3P09027 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC9.91□□□□□ -0.82
Hoxd3P09027 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC9.91□□□□□ -0.82
Hoxd3P09027 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Hoxd3P09027 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Hoxd3P09027 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms