Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Hoxc8P09025 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Gm7551-201ENSMUST00000089593 1074 ntBASIC13.26□□□□□ -0.29
Hoxc8P09025 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hoxc8P09025 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Gm13809-201ENSMUST00000117921 597 ntBASIC13.25□□□□□ -0.29
Hoxc8P09025 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC13.25□□□□□ -0.29
Hoxc8P09025 Gm15595-201ENSMUST00000120840 961 ntBASIC13.25□□□□□ -0.29
Hoxc8P09025 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxc8P09025 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Gm44882-201ENSMUST00000205702 802 ntBASIC13.25□□□□□ -0.29
Hoxc8P09025 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxc8P09025 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Gm10752-201ENSMUST00000218348 729 ntBASIC13.25□□□□□ -0.29
Hoxc8P09025 Gm4797-201ENSMUST00000219075 1283 ntBASIC13.25□□□□□ -0.29
Hoxc8P09025 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Gm5705-201ENSMUST00000066241 711 ntBASIC13.25□□□□□ -0.29
Hoxc8P09025 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hoxc8P09025 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hoxc8P09025 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.24□□□□□ -0.29
Hoxc8P09025 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Gm15881-201ENSMUST00000148792 942 ntBASIC13.24□□□□□ -0.29
Hoxc8P09025 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC13.24□□□□□ -0.29
Hoxc8P09025 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Gm9785-201ENSMUST00000062642 1006 ntBASIC13.24□□□□□ -0.29
Hoxc8P09025 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hoxc8P09025 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Hoxc8P09025 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Hoxc8P09025 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 67.2 ms