Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.87□□□□□ -0.51
ApoeP08226 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
ApoeP08226 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
ApoeP08226 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC11.87□□□□□ -0.51
ApoeP08226 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
ApoeP08226 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.86□□□□□ -0.51
ApoeP08226 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.86□□□□□ -0.51
ApoeP08226 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Gm14704-201ENSMUST00000120300 874 ntBASIC11.86□□□□□ -0.51
ApoeP08226 Gm15321-201ENSMUST00000121290 288 ntBASIC11.86□□□□□ -0.51
ApoeP08226 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.86□□□□□ -0.51
ApoeP08226 Gm6152-201ENSMUST00000151704 340 ntBASIC11.86□□□□□ -0.51
ApoeP08226 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC11.86□□□□□ -0.51
ApoeP08226 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
ApoeP08226 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.86□□□□□ -0.51
ApoeP08226 AC124732.1-201ENSMUST00000221551 910 ntBASIC11.86□□□□□ -0.51
ApoeP08226 Gm19220-201ENSMUST00000222682 803 ntBASIC11.86□□□□□ -0.51
ApoeP08226 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.86□□□□□ -0.51
ApoeP08226 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.86□□□□□ -0.51
ApoeP08226 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ApoeP08226 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ApoeP08226 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.86□□□□□ -0.51
ApoeP08226 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ApoeP08226 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ApoeP08226 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
ApoeP08226 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ApoeP08226 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ApoeP08226 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ApoeP08226 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Gm12384-201ENSMUST00000119228 919 ntBASIC11.85□□□□□ -0.51
ApoeP08226 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.85□□□□□ -0.51
ApoeP08226 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.85□□□□□ -0.51
ApoeP08226 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ApoeP08226 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ApoeP08226 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
ApoeP08226 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
ApoeP08226 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
ApoeP08226 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ApoeP08226 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ApoeP08226 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
ApoeP08226 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ApoeP08226 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms