Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
CfdP03953 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
CfdP03953 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.46□□□□□ -0.73
CfdP03953 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.46□□□□□ -0.73
CfdP03953 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
CfdP03953 Gm5687-201ENSMUST00000118252 640 ntBASIC10.46□□□□□ -0.73
CfdP03953 Gm14921-201ENSMUST00000118643 908 ntBASIC10.46□□□□□ -0.73
CfdP03953 Gm16342-201ENSMUST00000124025 1025 ntBASIC10.46□□□□□ -0.73
CfdP03953 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC10.46□□□□□ -0.73
CfdP03953 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.46□□□□□ -0.73
CfdP03953 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC10.46□□□□□ -0.73
CfdP03953 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Gm9797-201ENSMUST00000052902 613 ntBASIC10.46□□□□□ -0.73
CfdP03953 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
CfdP03953 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.46□□□□□ -0.74
CfdP03953 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC10.46□□□□□ -0.74
CfdP03953 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.46□□□□□ -0.74
CfdP03953 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.74
CfdP03953 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
CfdP03953 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.45□□□□□ -0.74
CfdP03953 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC10.45□□□□□ -0.74
CfdP03953 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.45□□□□□ -0.74
CfdP03953 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC10.45□□□□□ -0.74
CfdP03953 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.45□□□□□ -0.74
CfdP03953 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.45□□□□□ -0.74
CfdP03953 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
CfdP03953 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC10.45□□□□□ -0.74
CfdP03953 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
CfdP03953 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
CfdP03953 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
CfdP03953 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Gm15703-201ENSMUST00000120250 880 ntBASIC10.45□□□□□ -0.74
CfdP03953 Gm14822-201ENSMUST00000122247 291 ntBASIC10.45□□□□□ -0.74
CfdP03953 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC10.45□□□□□ -0.74
CfdP03953 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC10.45□□□□□ -0.74
CfdP03953 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
CfdP03953 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC10.45□□□□□ -0.74
CfdP03953 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
CfdP03953 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.45□□□□□ -0.74
CfdP03953 Gm28693-202ENSMUST00000190758 331 ntBASIC10.45□□□□□ -0.74
CfdP03953 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
CfdP03953 Gm8396-201ENSMUST00000057361 823 ntBASIC10.45□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms