Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Vti1aO89116 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.56□□□□□ -0.24
Vti1aO89116 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vti1aO89116 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.56□□□□□ -0.24
Vti1aO89116 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC13.56□□□□□ -0.24
Vti1aO89116 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Vti1aO89116 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Gm27046-201ENSMUST00000182160 463 ntBASIC13.56□□□□□ -0.24
Vti1aO89116 Gm13097-201ENSMUST00000210722 397 ntBASIC13.56□□□□□ -0.24
Vti1aO89116 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.56□□□□□ -0.24
Vti1aO89116 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.56□□□□□ -0.24
Vti1aO89116 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.56□□□□□ -0.24
Vti1aO89116 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.56□□□□□ -0.24
Vti1aO89116 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.56□□□□□ -0.24
Vti1aO89116 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC13.56□□□□□ -0.24
Vti1aO89116 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 AC167669.2-201ENSMUST00000224417 1620 ntBASIC13.56□□□□□ -0.24
Vti1aO89116 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Vti1aO89116 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Vti1aO89116 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.56□□□□□ -0.24
Vti1aO89116 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC13.55□□□□□ -0.24
Vti1aO89116 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Gm14130-201ENSMUST00000118417 987 ntBASIC13.55□□□□□ -0.24
Vti1aO89116 Gm13492-201ENSMUST00000119772 665 ntBASIC13.55□□□□□ -0.24
Vti1aO89116 Gm15547-201ENSMUST00000122152 333 ntBASIC13.55□□□□□ -0.24
Vti1aO89116 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.55□□□□□ -0.24
Vti1aO89116 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.55□□□□□ -0.24
Vti1aO89116 Gm2260-201ENSMUST00000184965 657 ntBASIC13.55□□□□□ -0.24
Vti1aO89116 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Gm38273-201ENSMUST00000194987 2382 ntBASIC13.55□□□□□ -0.24
Vti1aO89116 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Vti1aO89116 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.55□□□□□ -0.24
Vti1aO89116 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Vti1aO89116 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Gm43289-201ENSMUST00000200537 1475 ntBASIC13.55□□□□□ -0.24
Vti1aO89116 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Vti1aO89116 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Vti1aO89116 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.54□□□□□ -0.24
Vti1aO89116 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vti1aO89116 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Vti1aO89116 Gm11930-201ENSMUST00000117788 190 ntBASIC13.54□□□□□ -0.24
Vti1aO89116 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.54□□□□□ -0.24
Vti1aO89116 Gm19208-201ENSMUST00000213861 912 ntBASIC13.54□□□□□ -0.24
Vti1aO89116 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13.54□□□□□ -0.24
Vti1aO89116 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Vti1aO89116 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Vti1aO89116 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.54□□□□□ -0.24
Vti1aO89116 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Vti1aO89116 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.54□□□□□ -0.24
Vti1aO89116 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms