Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Chrna4O70174 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.65□□□□□ -0.38
Chrna4O70174 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Chrna4O70174 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.65□□□□□ -0.39
Chrna4O70174 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.39
Chrna4O70174 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.64□□□□□ -0.39
Chrna4O70174 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chrna4O70174 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Gm9630-201ENSMUST00000178304 885 ntBASIC12.64□□□□□ -0.39
Chrna4O70174 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.64□□□□□ -0.39
Chrna4O70174 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.64□□□□□ -0.39
Chrna4O70174 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Chrna4O70174 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Chrna4O70174 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chrna4O70174 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chrna4O70174 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.63□□□□□ -0.39
Chrna4O70174 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Chrna4O70174 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.63□□□□□ -0.39
Chrna4O70174 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Chrna4O70174 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.63□□□□□ -0.39
Chrna4O70174 Gm27243-201ENSMUST00000183964 521 ntBASIC12.63□□□□□ -0.39
Chrna4O70174 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.63□□□□□ -0.39
Chrna4O70174 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.63□□□□□ -0.39
Chrna4O70174 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.63□□□□□ -0.39
Chrna4O70174 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.63□□□□□ -0.39
Chrna4O70174 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Chrna4O70174 Gm44124-201ENSMUST00000204159 472 ntBASIC12.63□□□□□ -0.39
Chrna4O70174 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.63□□□□□ -0.39
Chrna4O70174 Gm45930-201ENSMUST00000221330 292 ntBASIC12.63□□□□□ -0.39
Chrna4O70174 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Chrna4O70174 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.63□□□□□ -0.39
Chrna4O70174 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Chrna4O70174 Gm37472-201ENSMUST00000192342 4052 ntBASIC12.62□□□□□ -0.39
Chrna4O70174 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Chrna4O70174 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Chrna4O70174 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms