Protein–RNA interactions for Protein: O55029

Copb2, Coatomer subunit beta', mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb2O55029 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Gm12314-201ENSMUST00000118104 538 ntBASIC14.41□□□□□ -0.1
Copb2O55029 Gm14277-201ENSMUST00000121195 360 ntBASIC14.41□□□□□ -0.1
Copb2O55029 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Mir5132-201ENSMUST00000175166 71 ntBASIC14.41□□□□□ -0.1
Copb2O55029 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.41□□□□□ -0.1
Copb2O55029 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
Copb2O55029 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Copb2O55029 Gstp-ps-201ENSMUST00000195526 631 ntBASIC14.41□□□□□ -0.1
Copb2O55029 Gm42937-201ENSMUST00000197360 752 ntBASIC14.41□□□□□ -0.1
Copb2O55029 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.41□□□□□ -0.1
Copb2O55029 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Copb2O55029 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.41□□□□□ -0.1
Copb2O55029 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Copb2O55029 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Copb2O55029 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Copb2O55029 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Copb2O55029 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.4□□□□□ -0.1
Copb2O55029 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Copb2O55029 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Copb2O55029 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Copb2O55029 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC14.4□□□□□ -0.1
Copb2O55029 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.4□□□□□ -0.1
Copb2O55029 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Copb2O55029 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Gm11439-201ENSMUST00000118598 409 ntBASIC14.4□□□□□ -0.1
Copb2O55029 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.4□□□□□ -0.1
Copb2O55029 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Copb2O55029 Gm5070-201ENSMUST00000177599 862 ntBASIC14.4□□□□□ -0.1
Copb2O55029 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Gm44651-201ENSMUST00000207343 372 ntBASIC14.4□□□□□ -0.1
Copb2O55029 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Gm18212-201ENSMUST00000211678 889 ntBASIC14.4□□□□□ -0.1
Copb2O55029 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.4□□□□□ -0.1
Copb2O55029 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Copb2O55029 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Copb2O55029 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Copb2O55029 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Copb2O55029 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Copb2O55029 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Copb2O55029 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Copb2O55029 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Copb2O55029 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC14.39□□□□□ -0.11
Copb2O55029 Gm8494-201ENSMUST00000178171 1233 ntBASIC14.39□□□□□ -0.11
Copb2O55029 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.39□□□□□ -0.11
Copb2O55029 Rps4l-202ENSMUST00000204242 789 ntBASIC14.39□□□□□ -0.11
Copb2O55029 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.39□□□□□ -0.11
Copb2O55029 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Copb2O55029 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC14.39□□□□□ -0.11
Copb2O55029 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Copb2O55029 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Copb2O55029 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Copb2O55029 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.39□□□□□ -0.11
Copb2O55029 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Copb2O55029 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms