Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.07□□□□□ -0.16
Stx1aO35526 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Stx1aO35526 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.07□□□□□ -0.16
Stx1aO35526 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Stx1aO35526 Gm42943-201ENSMUST00000199676 3242 ntBASIC14.07□□□□□ -0.16
Stx1aO35526 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Stx1aO35526 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Stx1aO35526 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.07□□□□□ -0.16
Stx1aO35526 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC14.07□□□□□ -0.16
Stx1aO35526 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.06□□□□□ -0.16
Stx1aO35526 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Stx1aO35526 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Gm24231-201ENSMUST00000104315 133 ntBASIC14.06□□□□□ -0.16
Stx1aO35526 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC14.06□□□□□ -0.16
Stx1aO35526 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.06□□□□□ -0.16
Stx1aO35526 Gm12384-201ENSMUST00000119228 919 ntBASIC14.06□□□□□ -0.16
Stx1aO35526 Gm14057-201ENSMUST00000120631 482 ntBASIC14.06□□□□□ -0.16
Stx1aO35526 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC14.06□□□□□ -0.16
Stx1aO35526 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Gm17208-201ENSMUST00000168388 535 ntBASIC14.06□□□□□ -0.16
Stx1aO35526 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.06□□□□□ -0.16
Stx1aO35526 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.06□□□□□ -0.16
Stx1aO35526 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Stx1aO35526 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Stx1aO35526 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Stx1aO35526 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.06□□□□□ -0.16
Stx1aO35526 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC14.06□□□□□ -0.16
Stx1aO35526 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Stx1aO35526 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Stx1aO35526 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC14.05□□□□□ -0.16
Stx1aO35526 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Stx1aO35526 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Stx1aO35526 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Stx1aO35526 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Stx1aO35526 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Stx1aO35526 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Snord83b-201ENSMUST00000104546 94 ntBASIC14.05□□□□□ -0.16
Stx1aO35526 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC14.05□□□□□ -0.16
Stx1aO35526 Gm13612-201ENSMUST00000119276 390 ntBASIC14.05□□□□□ -0.16
Stx1aO35526 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
Stx1aO35526 Proscos-202ENSMUST00000178990 666 ntBASIC14.05□□□□□ -0.16
Stx1aO35526 Gm37922-201ENSMUST00000195596 455 ntBASIC14.05□□□□□ -0.16
Stx1aO35526 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.05□□□□□ -0.16
Stx1aO35526 AC155252.1-201ENSMUST00000226462 1208 ntBASIC14.05□□□□□ -0.16
Stx1aO35526 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.05□□□□□ -0.16
Stx1aO35526 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC14.05□□□□□ -0.16
Stx1aO35526 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Stx1aO35526 Npnt-203ENSMUST00000093971 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.05□□□□□ -0.16
Stx1aO35526 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
Stx1aO35526 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Stx1aO35526 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.04□□□□□ -0.16
Stx1aO35526 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Stx1aO35526 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stx1aO35526 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Stx1aO35526 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms