Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC9.91□□□□□ -0.82
Efnb3O35393 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC9.91□□□□□ -0.82
Efnb3O35393 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.91□□□□□ -0.82
Efnb3O35393 Ighv1-60-201ENSMUST00000195816 405 ntBASIC9.91□□□□□ -0.82
Efnb3O35393 Gm35960-201ENSMUST00000202712 767 ntBASIC9.91□□□□□ -0.82
Efnb3O35393 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Mir339-201ENSMUST00000083659 96 ntBASIC9.91□□□□□ -0.82
Efnb3O35393 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Efnb3O35393 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Efnb3O35393 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Efnb3O35393 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Efnb3O35393 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Efnb3O35393 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC9.91□□□□□ -0.82
Efnb3O35393 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC9.91□□□□□ -0.82
Efnb3O35393 AC154517.2-201ENSMUST00000220829 2458 ntBASIC9.91□□□□□ -0.82
Efnb3O35393 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Efnb3O35393 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Efnb3O35393 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Cog3-203ENSMUST00000227473 4197 ntBASIC9.9□□□□□ -0.82
Efnb3O35393 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.9□□□□□ -0.82
Efnb3O35393 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC9.9□□□□□ -0.82
Efnb3O35393 AL593843.1-201ENSMUST00000195891 145 ntBASIC9.9□□□□□ -0.82
Efnb3O35393 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC9.9□□□□□ -0.82
Efnb3O35393 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Gm18624-201ENSMUST00000220966 658 ntBASIC9.9□□□□□ -0.82
Efnb3O35393 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Arhgef33-209ENSMUST00000225223 714 ntBASIC9.9□□□□□ -0.82
Efnb3O35393 AC132317.1-201ENSMUST00000227227 962 ntBASIC9.9□□□□□ -0.82
Efnb3O35393 Itm2b-204ENSMUST00000228637 783 ntBASIC9.9□□□□□ -0.82
Efnb3O35393 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC9.9□□□□□ -0.82
Efnb3O35393 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Efnb3O35393 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Efnb3O35393 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Efnb3O35393 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC9.9□□□□□ -0.83
Efnb3O35393 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms