Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.87□□□□□ -0.35
Trim55G3X8Y1 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.87□□□□□ -0.35
Trim55G3X8Y1 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Trim55G3X8Y1 Gm9466-201ENSMUST00000218144 2246 ntBASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Gm42141-201ENSMUST00000196534 2172 ntBASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Gm6973-201ENSMUST00000117080 721 ntBASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Gm6222-201ENSMUST00000120787 396 ntBASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trim55G3X8Y1 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC12.85□□□□□ -0.35
Trim55G3X8Y1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Tyw1-202ENSMUST00000044204 4698 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trim55G3X8Y1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms