Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Gm45758-201ENSMUST00000212448 1006 ntBASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Ccdc188F6WEU2 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Gm11560-201ENSMUST00000117567 948 ntBASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Gm11634-201ENSMUST00000154147 755 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Gm24248-201ENSMUST00000157321 322 ntBASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Gm6644-201ENSMUST00000186507 951 ntBASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Gm18304-201ENSMUST00000189162 546 ntBASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Gm9136-201ENSMUST00000193368 454 ntBASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Mir326-201ENSMUST00000083637 95 ntBASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Gm43334-201ENSMUST00000197740 1318 ntBASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Ccdc188F6WEU2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Cidec-203ENSMUST00000113091 785 ntAPPRIS ALT1 TSL 3 BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm22711-201ENSMUST00000116890 133 ntBASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm16167-201ENSMUST00000160428 1065 ntBASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm25677-201ENSMUST00000174983 72 ntBASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm26134-201ENSMUST00000178484 110 ntBASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm45085-201ENSMUST00000209100 441 ntBASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 AC105408.1-201ENSMUST00000227771 802 ntBASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.56□□□□□ -0.4
Ccdc188F6WEU2 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms