Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.24□□□□□ -0.61
Shank1D3YZU1 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm1821-202ENSMUST00000227415 750 ntBASIC11.24□□□□□ -0.61
Shank1D3YZU1 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm13888-201ENSMUST00000119148 422 ntBASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm12029-201ENSMUST00000120073 832 ntBASIC11.24□□□□□ -0.61
Shank1D3YZU1 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.24□□□□□ -0.61
Shank1D3YZU1 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Shank1D3YZU1 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Shank1D3YZU1 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm25517-201ENSMUST00000083865 134 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm15711-201ENSMUST00000118889 535 ntBASIC11.23□□□□□ -0.61
Shank1D3YZU1 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.23□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms