Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 Gm11591-201ENSMUST00000120063 702 ntBASIC12.24□□□□□ -0.45
Clip3B9EHT4 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Gm7809-201ENSMUST00000153199 742 ntBASIC12.24□□□□□ -0.45
Clip3B9EHT4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.24□□□□□ -0.45
Clip3B9EHT4 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.24□□□□□ -0.45
Clip3B9EHT4 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.24□□□□□ -0.45
Clip3B9EHT4 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Clip3B9EHT4 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.23□□□□□ -0.45
Clip3B9EHT4 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.23□□□□□ -0.45
Clip3B9EHT4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.23□□□□□ -0.45
Clip3B9EHT4 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.23□□□□□ -0.45
Clip3B9EHT4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Gm12502-201ENSMUST00000120197 444 ntBASIC12.23□□□□□ -0.45
Clip3B9EHT4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Gm27501-201ENSMUST00000183599 107 ntBASIC12.23□□□□□ -0.45
Clip3B9EHT4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.23□□□□□ -0.45
Clip3B9EHT4 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.23□□□□□ -0.45
Clip3B9EHT4 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Clip3B9EHT4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm5859-201ENSMUST00000165401 2324 ntBASIC12.22□□□□□ -0.45
Clip3B9EHT4 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.22□□□□□ -0.45
Clip3B9EHT4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.22□□□□□ -0.45
Clip3B9EHT4 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.22□□□□□ -0.45
Clip3B9EHT4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Clip3B9EHT4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms