Protein–RNA interactions for Protein: A7VMS2

Gm11127, MHC classIb T15, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11127A7VMS2 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Gm11127A7VMS2 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Gm12341-201ENSMUST00000119724 503 ntBASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Gm19931-201ENSMUST00000198920 368 ntBASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Gm18307-201ENSMUST00000206864 949 ntBASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Gm11127A7VMS2 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm45532-201ENSMUST00000210342 3620 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm6447-201ENSMUST00000118905 835 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm28631-201ENSMUST00000190740 334 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm10576-201ENSMUST00000191927 825 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm44985-201ENSMUST00000206202 1016 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm2423-201ENSMUST00000074863 733 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Gm11127A7VMS2 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Gm11127A7VMS2 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms