Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 AC165260.3-201ENSMUST00000225101 665 ntBASIC10.07□□□□□ -0.8
Chd6A3KFM7 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Ighv1-62-3-201ENSMUST00000103532 405 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Gm11989-201ENSMUST00000117240 672 ntBASIC10.07□□□□□ -0.8
Chd6A3KFM7 Gm11362-201ENSMUST00000118838 850 ntBASIC10.07□□□□□ -0.8
Chd6A3KFM7 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC10.07□□□□□ -0.8
Chd6A3KFM7 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Chd6A3KFM7 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm23595-201ENSMUST00000104306 130 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm5205-201ENSMUST00000182253 1003 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm7069-201ENSMUST00000182418 1008 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Sult2b1-207ENSMUST00000210754 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm15566-201ENSMUST00000121130 590 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm14255-201ENSMUST00000128846 248 ntTSL 5 BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm5335-201ENSMUST00000182995 1000 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm17936-201ENSMUST00000199413 988 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Wbp1-209ENSMUST00000205023 716 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm9661-201ENSMUST00000221611 1122 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 CT571271.1-201ENSMUST00000227071 670 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Clrn1-201ENSMUST00000051408 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm37133-201ENSMUST00000192705 1922 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Gm6992-201ENSMUST00000217973 1607 ntBASIC10.06□□□□□ -0.8
Chd6A3KFM7 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC10.06□□□□□ -0.8
Chd6A3KFM7 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms