Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Gm37922-201ENSMUST00000195596 455 ntBASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 AC134254.1-201ENSMUST00000221362 167 ntBASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 AC130671.2-201ENSMUST00000227224 1621 ntBASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav12d-1A0N8R0 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm8213-201ENSMUST00000118191 441 ntBASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm13612-201ENSMUST00000119276 390 ntBASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm2231-201ENSMUST00000125661 612 ntBASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm17208-201ENSMUST00000168388 535 ntBASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Gm44855-201ENSMUST00000205725 362 ntBASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav12d-1A0N8R0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms