Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav5-4A0A075B652 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gm8213-201ENSMUST00000118191 441 ntBASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gm13123-201ENSMUST00000122173 492 ntBASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gm37922-201ENSMUST00000195596 455 ntBASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gm45266-201ENSMUST00000210111 2173 ntBASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 CT030657.3-201ENSMUST00000222707 1200 ntBASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gm5356-201ENSMUST00000093326 615 ntBASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav5-4A0A075B652 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Gm14608-201ENSMUST00000120030 1553 ntBASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Gm45684-201ENSMUST00000210244 1571 ntBASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Gm12291-201ENSMUST00000121627 311 ntBASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Gm8810-201ENSMUST00000172895 754 ntBASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.53□□□□□ -0.72
Trav5-4A0A075B652 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms