Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gm15467-201ENSMUST00000120582 445 ntBASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gm6161-201ENSMUST00000121942 1102 ntBASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gm6254-201ENSMUST00000168178 1072 ntBASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gm6153-201ENSMUST00000172004 1058 ntBASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gm5641-202ENSMUST00000198699 1080 ntBASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 CT573086.1-201ENSMUST00000227202 1074 ntBASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Prf1-202ENSMUST00000219375 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Gm45496-201ENSMUST00000209918 2917 ntBASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Trav8-1A0A075B641 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Btrc-209ENSMUST00000224478 2194 ntBASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trav8-1A0A075B641 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gm25287-201ENSMUST00000103846 110 ntBASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gm22918-201ENSMUST00000103855 110 ntBASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gm25948-201ENSMUST00000175334 112 ntBASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gm21470-201ENSMUST00000187680 696 ntBASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gm18206-201ENSMUST00000207027 926 ntBASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 AC154806.6-201ENSMUST00000228192 202 ntBASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gm13859-201ENSMUST00000119936 1423 ntBASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 CT025681.1-201ENSMUST00000225453 1855 ntBASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trav8-1A0A075B641 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trav8-1A0A075B641 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms