Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afb3S4R1G7 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Gm10156-201ENSMUST00000122364 462 ntBASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Gm23363-201ENSMUST00000175024 79 ntBASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Gm17794-201ENSMUST00000220252 955 ntBASIC11.32□□□□□ -0.6
H2afb3S4R1G7 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 n-R5s77-201ENSMUST00000083757 119 ntBASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afb3S4R1G7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm14704-201ENSMUST00000120300 874 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm11637-201ENSMUST00000120601 592 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm13123-201ENSMUST00000122173 492 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
H2afb3S4R1G7 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms