Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Scn8aQ9WTU3 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Gm45598-202ENSMUST00000210719 986 ntBASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Mir433-201ENSMUST00000093564 124 ntBASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Scn8aQ9WTU3 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm14277-201ENSMUST00000121195 360 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm5525-201ENSMUST00000190438 1312 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Cstl1-201ENSMUST00000109952 629 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm26361-201ENSMUST00000158868 186 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm9630-201ENSMUST00000178304 885 ntBASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.54□□□□□ -0.4
Scn8aQ9WTU3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms