Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Prpf40aQ9R1C7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf40aQ9R1C7 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.85□□□□□ -0.19
Prpf40aQ9R1C7 Dctn4-202ENSMUST00000223590 1530 ntBASIC13.85□□□□□ -0.19
Prpf40aQ9R1C7 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Prpf40aQ9R1C7 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gm23958-201ENSMUST00000157207 105 ntBASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gm16379-201ENSMUST00000161469 348 ntBASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gm25927-201ENSMUST00000175058 117 ntBASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gm8762-201ENSMUST00000193486 339 ntBASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Mir339-201ENSMUST00000083659 96 ntBASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Prpf40aQ9R1C7 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Prpf40aQ9R1C7 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Prpf40aQ9R1C7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Gm27514-201ENSMUST00000183692 110 ntBASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Gm5370-201ENSMUST00000187187 574 ntBASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Gm42660-201ENSMUST00000197733 947 ntBASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Gm32025-201ENSMUST00000217960 307 ntBASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Prpf40aQ9R1C7 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Prpf40aQ9R1C7 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms