Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Gm12241-201ENSMUST00000118330 726 ntBASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Gm8738-201ENSMUST00000172606 329 ntBASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Gm7046-201ENSMUST00000221351 977 ntBASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Clcf1Q9QZM3 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Gm13342-201ENSMUST00000121055 207 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Mospd4-201ENSMUST00000180618 576 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Gm8227-201ENSMUST00000223306 571 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Cts7-204ENSMUST00000225321 1257 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.41□□□□□ -0.58
Clcf1Q9QZM3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Clcf1Q9QZM3 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms