Protein–RNA interactions for Protein: Q9JL35

Hmgn5, High mobility group nucleosome-binding domain-containing protein 5, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn5Q9JL35 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Itm2b-204ENSMUST00000228637 783 ntBASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Hmgn5Q9JL35 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Gm13223-201ENSMUST00000118609 747 ntBASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Gm28693-202ENSMUST00000190758 331 ntBASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hmgn5Q9JL35 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn5Q9JL35 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC14.08□□□□□ -0.15
Hmgn5Q9JL35 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn5Q9JL35 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn5Q9JL35 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC14.08□□□□□ -0.15
Hmgn5Q9JL35 Retreg1-206ENSMUST00000228306 1430 ntBASIC14.08□□□□□ -0.15
Hmgn5Q9JL35 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hmgn5Q9JL35 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Gm2756-201ENSMUST00000195851 400 ntBASIC14.08□□□□□ -0.16
Hmgn5Q9JL35 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms