Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Hrc-201ENSMUST00000085351 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Olfr315-202ENSMUST00000203256 2458 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
Trem1Q9JKE2 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.23□□□□□ -0.61
Trem1Q9JKE2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Tia1-206ENSMUST00000113713 3108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm5566-201ENSMUST00000116118 459 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm9719-201ENSMUST00000162765 543 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm8927-201ENSMUST00000181978 981 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm45161-201ENSMUST00000207316 2263 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 AC121804.3-201ENSMUST00000223420 295 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Gm3222-201ENSMUST00000071282 990 ntBASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trem1Q9JKE2 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Gm12428-201ENSMUST00000119844 727 ntBASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Gm27390-201ENSMUST00000184516 176 ntBASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trem1Q9JKE2 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trem1Q9JKE2 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.21□□□□□ -0.62
Trem1Q9JKE2 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trem1Q9JKE2 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC11.21□□□□□ -0.62
Trem1Q9JKE2 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Trem1Q9JKE2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
Trem1Q9JKE2 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trem1Q9JKE2 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trem1Q9JKE2 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms