Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 AC122811.1-201ENSMUST00000222257 2921 ntBASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
Ube4bQ9ES00 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Cd63-ps-201ENSMUST00000145417 875 ntBASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 AC159621.2-201ENSMUST00000223519 1326 ntBASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ube4bQ9ES00 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.05□□□□□ -0.48
Ube4bQ9ES00 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gm9063-201ENSMUST00000223299 582 ntBASIC12.05□□□□□ -0.48
Ube4bQ9ES00 AC126408.1-201ENSMUST00000225184 523 ntBASIC12.05□□□□□ -0.48
Ube4bQ9ES00 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ube4bQ9ES00 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ube4bQ9ES00 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms