Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Tubb3Q9ERD7 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm2231-201ENSMUST00000125661 612 ntBASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm7029-201ENSMUST00000173226 450 ntBASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm8801-201ENSMUST00000173255 1064 ntBASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm27390-201ENSMUST00000184516 176 ntBASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm38002-201ENSMUST00000193255 180 ntBASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Gm26035-201ENSMUST00000083065 308 ntBASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Tubb3Q9ERD7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Gm43179-201ENSMUST00000198797 275 ntBASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 AC140406.1-201ENSMUST00000226481 465 ntBASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Gm9823-201ENSMUST00000051212 327 ntBASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Tubb3Q9ERD7 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Tubb3Q9ERD7 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 89.9 ms