Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp4bQ9D8B3 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Chmp4bQ9D8B3 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Chmp4bQ9D8B3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp4bQ9D8B3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp4bQ9D8B3 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp4bQ9D8B3 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp4bQ9D8B3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC15.83■□□□□ 0.13
Chmp4bQ9D8B3 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp4bQ9D8B3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp4bQ9D8B3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Chmp4bQ9D8B3 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 CT573086.2-201ENSMUST00000227277 4992 ntBASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Gm12502-201ENSMUST00000120197 444 ntBASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Gm8018-201ENSMUST00000173536 789 ntBASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Gm18187-201ENSMUST00000196476 984 ntBASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Chmp4bQ9D8B3 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Gm11591-201ENSMUST00000120063 702 ntBASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Gm5745-201ENSMUST00000183748 313 ntBASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Gm45925-201ENSMUST00000218882 744 ntBASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 AC126253.1-201ENSMUST00000227974 824 ntBASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Chmp4bQ9D8B3 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Gm13226-201ENSMUST00000117838 404 ntBASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Gm14660-201ENSMUST00000119809 575 ntBASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 AC108416.1-202ENSMUST00000228927 1201 ntBASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Chmp4bQ9D8B3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms