Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Chmp5Q9D7S9 Gm44260-201ENSMUST00000204946 2094 ntBASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Arhgef3-204ENSMUST00000225949 3198 ntBASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Gm15703-201ENSMUST00000120250 880 ntBASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Proscos-202ENSMUST00000178990 666 ntBASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC15.67■□□□□ 0.1
Chmp5Q9D7S9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Gm14132-201ENSMUST00000117188 1719 ntBASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Gm13612-201ENSMUST00000119276 390 ntBASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Gm38671-201ENSMUST00000200573 130 ntBASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 AC155252.1-201ENSMUST00000226462 1208 ntBASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Cog3-203ENSMUST00000227473 4197 ntBASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Chmp5Q9D7S9 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Gm16479-201ENSMUST00000121706 932 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Gm16296-201ENSMUST00000159905 325 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 AC125206.2-201ENSMUST00000217454 574 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Chmp5Q9D7S9 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms