Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Gm26185-201ENSMUST00000157692 266 ntBASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Gm10012-201ENSMUST00000078252 192 ntBASIC15.02■□□□□ -0
Chmp4cQ9D7F7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4cQ9D7F7 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4cQ9D7F7 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4cQ9D7F7 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4cQ9D7F7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4cQ9D7F7 Gm7224-201ENSMUST00000121359 2066 ntBASIC15.02□□□□□ -0.01
Chmp4cQ9D7F7 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4cQ9D7F7 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4cQ9D7F7 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Chmp4cQ9D7F7 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 AC138604.1-201ENSMUST00000226969 739 ntBASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Chmp4cQ9D7F7 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Gm12291-201ENSMUST00000121627 311 ntBASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Mir1894-201ENSMUST00000122802 81 ntBASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15□□□□□ -0.01
Chmp4cQ9D7F7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Gm5035-201ENSMUST00000215581 927 ntBASIC15□□□□□ -0.01
Chmp4cQ9D7F7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Chmp4cQ9D7F7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms