Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.87□□□□□ -0.51
Upk1aQ9D132 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.87□□□□□ -0.51
Upk1aQ9D132 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.87□□□□□ -0.51
Upk1aQ9D132 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.87□□□□□ -0.51
Upk1aQ9D132 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Gm45668-201ENSMUST00000211271 493 ntBASIC11.86□□□□□ -0.51
Upk1aQ9D132 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.86□□□□□ -0.51
Upk1aQ9D132 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.86□□□□□ -0.51
Upk1aQ9D132 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Gm15823-201ENSMUST00000064305 670 ntBASIC11.86□□□□□ -0.51
Upk1aQ9D132 Gm16372-201ENSMUST00000073088 450 ntBASIC11.86□□□□□ -0.51
Upk1aQ9D132 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Upk1aQ9D132 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.86□□□□□ -0.51
Upk1aQ9D132 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 195.4 ms