Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Shmt2Q9CZN7 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm13226-201ENSMUST00000117838 404 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm11425-201ENSMUST00000119608 498 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm40466-201ENSMUST00000212174 422 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm10146-201ENSMUST00000072739 309 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm9396-201ENSMUST00000076703 567 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm25857-201ENSMUST00000082788 129 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Shmt2Q9CZN7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Gm12384-201ENSMUST00000119228 919 ntBASIC12□□□□□ -0.49
Shmt2Q9CZN7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Gm2639-201ENSMUST00000156881 1297 ntBASIC12□□□□□ -0.49
Shmt2Q9CZN7 Mir1982-201ENSMUST00000157368 74 ntBASIC12□□□□□ -0.49
Shmt2Q9CZN7 Gm27731-201ENSMUST00000185192 107 ntBASIC12□□□□□ -0.49
Shmt2Q9CZN7 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 AC122459.1-201ENSMUST00000228373 885 ntBASIC12□□□□□ -0.49
Shmt2Q9CZN7 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12□□□□□ -0.49
Shmt2Q9CZN7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC12□□□□□ -0.49
Shmt2Q9CZN7 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Shmt2Q9CZN7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Shmt2Q9CZN7 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Shmt2Q9CZN7 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms