Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm15703-201ENSMUST00000120250 880 ntBASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Snf8Q9CZ28 Gm40377-201ENSMUST00000204604 2015 ntBASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Map1b-203ENSMUST00000223725 2669 ntBASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Gm8463-201ENSMUST00000208573 613 ntBASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Gm45668-201ENSMUST00000211271 493 ntBASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Snf8Q9CZ28 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Snf8Q9CZ28 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms