Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trim13Q9CYB0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Gm28760-201ENSMUST00000185995 736 ntBASIC11.61□□□□□ -0.55
Trim13Q9CYB0 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trim13Q9CYB0 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Gm15371-201ENSMUST00000117057 784 ntBASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Gm13689-201ENSMUST00000119360 685 ntBASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.6□□□□□ -0.55
Trim13Q9CYB0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Gm5354-201ENSMUST00000182417 973 ntBASIC11.6□□□□□ -0.55
Trim13Q9CYB0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trim13Q9CYB0 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms