Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa3Q9CQ71 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gm23931-201ENSMUST00000103842 109 ntBASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gm12329-201ENSMUST00000120829 1007 ntBASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gm8062-201ENSMUST00000139696 444 ntBASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gm24548-201ENSMUST00000158650 108 ntBASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gm26035-201ENSMUST00000083065 308 ntBASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gm22058-201ENSMUST00000083393 310 ntBASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa3Q9CQ71 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Gm22018-201ENSMUST00000104357 131 ntBASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Gm17823-201ENSMUST00000217830 1006 ntBASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Gm7789-202ENSMUST00000211273 1400 ntBASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa3Q9CQ71 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Daam2-202ENSMUST00000224595 1926 ntBASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Gm45266-201ENSMUST00000210111 2173 ntBASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Rpa3Q9CQ71 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms