Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ska1Q9CPV1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gm19184-201ENSMUST00000196798 928 ntBASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gm18018-201ENSMUST00000198273 408 ntBASIC11.88□□□□□ -0.51
Ska1Q9CPV1 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.88□□□□□ -0.51
Ska1Q9CPV1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Gm27390-201ENSMUST00000184516 176 ntBASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ska1Q9CPV1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms