Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trim11Q99PQ2 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Gm24231-201ENSMUST00000104315 133 ntBASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Gm4984-201ENSMUST00000115987 360 ntBASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Rmrp-201ENSMUST00000157463 271 ntBASIC14.3□□□□□ -0.12
Trim11Q99PQ2 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 AL732506.1-201ENSMUST00000226420 281 ntBASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Gm10339-203ENSMUST00000225409 1671 ntBASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trim11Q99PQ2 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Gm8131-201ENSMUST00000213783 1570 ntBASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trim11Q99PQ2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Gm12390-201ENSMUST00000117897 397 ntBASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 AC167013.1-201ENSMUST00000228592 202 ntBASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim11Q99PQ2 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms