Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pcdh15Q99PJ1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm12179-201ENSMUST00000118344 1272 ntBASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm24248-201ENSMUST00000157321 322 ntBASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm10807-201ENSMUST00000177134 795 ntBASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm39288-201ENSMUST00000210554 446 ntBASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm23105-201ENSMUST00000083719 134 ntBASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm42769-201ENSMUST00000198576 1659 ntBASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.84□□□□□ -0.19
Pcdh15Q99PJ1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh15Q99PJ1 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.83□□□□□ -0.19
Pcdh15Q99PJ1 Gm18294-201ENSMUST00000176980 1748 ntBASIC13.83□□□□□ -0.19
Pcdh15Q99PJ1 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh15Q99PJ1 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Pcdh15Q99PJ1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Gm11619-201ENSMUST00000117474 237 ntBASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Gm12791-201ENSMUST00000120788 655 ntBASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Gm44882-201ENSMUST00000205702 802 ntBASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 AC114645.1-201ENSMUST00000215831 187 ntBASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Gm14005-208ENSMUST00000223654 681 ntBASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 AC122346.3-201ENSMUST00000223983 306 ntBASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdh15Q99PJ1 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Gm6655-201ENSMUST00000201932 1309 ntBASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Gm13351-201ENSMUST00000118087 414 ntBASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Gm25604-201ENSMUST00000158359 133 ntBASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Gm9507-202ENSMUST00000180157 654 ntBASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdh15Q99PJ1 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms