Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clp1Q99LI9 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clp1Q99LI9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Clp1Q99LI9 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clp1Q99LI9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Clp1Q99LI9 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clp1Q99LI9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Clp1Q99LI9 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.23□□□□□ -0.29
Clp1Q99LI9 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clp1Q99LI9 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Clp1Q99LI9 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm24231-201ENSMUST00000104315 133 ntBASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm13888-201ENSMUST00000119148 422 ntBASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm9540-201ENSMUST00000188230 478 ntBASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm45550-201ENSMUST00000209380 946 ntBASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.22□□□□□ -0.29
Clp1Q99LI9 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.22□□□□□ -0.29
Clp1Q99LI9 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Clp1Q99LI9 Retreg1-206ENSMUST00000228306 1430 ntBASIC13.22□□□□□ -0.29
Clp1Q99LI9 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.21□□□□□ -0.29
Clp1Q99LI9 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm4993-201ENSMUST00000118719 1174 ntBASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm15881-201ENSMUST00000148792 942 ntBASIC13.21□□□□□ -0.29
Clp1Q99LI9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm8365-201ENSMUST00000197334 648 ntBASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm7600-201ENSMUST00000209657 785 ntBASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm26448-201ENSMUST00000082446 203 ntBASIC13.21□□□□□ -0.29
Clp1Q99LI9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Clp1Q99LI9 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clp1Q99LI9 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Clp1Q99LI9 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms