Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Vmp1Q99KU0 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Gm12384-201ENSMUST00000119228 919 ntBASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Mir7085-201ENSMUST00000184353 66 ntBASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 AY702102-202ENSMUST00000194651 1173 ntBASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.16□□□□□ -0.46
Vmp1Q99KU0 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Vmp1Q99KU0 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm16177-201ENSMUST00000120728 718 ntBASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm13123-201ENSMUST00000122173 492 ntBASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Snora78-201ENSMUST00000158630 128 ntBASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC12.15□□□□□ -0.46
Vmp1Q99KU0 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms