Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Gm19184-201ENSMUST00000196798 928 ntBASIC12.67□□□□□ -0.38
Cdk9Q99J95 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.67□□□□□ -0.38
Cdk9Q99J95 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.67□□□□□ -0.38
Cdk9Q99J95 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.67□□□□□ -0.38
Cdk9Q99J95 Gm6218-201ENSMUST00000219812 628 ntBASIC12.67□□□□□ -0.38
Cdk9Q99J95 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.67□□□□□ -0.38
Cdk9Q99J95 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.67□□□□□ -0.38
Cdk9Q99J95 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.67□□□□□ -0.38
Cdk9Q99J95 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cdk9Q99J95 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Gm22189-201ENSMUST00000103822 86 ntBASIC12.66□□□□□ -0.38
Cdk9Q99J95 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC12.66□□□□□ -0.38
Cdk9Q99J95 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.66□□□□□ -0.38
Cdk9Q99J95 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.66□□□□□ -0.38
Cdk9Q99J95 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Gm9797-201ENSMUST00000052902 613 ntBASIC12.66□□□□□ -0.38
Cdk9Q99J95 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.66□□□□□ -0.38
Cdk9Q99J95 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cdk9Q99J95 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.65□□□□□ -0.38
Cdk9Q99J95 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cdk9Q99J95 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.65□□□□□ -0.39
Cdk9Q99J95 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Cdk9Q99J95 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
Cdk9Q99J95 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cdk9Q99J95 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms