Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Smc1bQ920F6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Smc1bQ920F6 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Gm11930-201ENSMUST00000117788 190 ntBASIC14.53□□□□□ -0.08
Smc1bQ920F6 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Gm18556-201ENSMUST00000219748 1031 ntBASIC14.53□□□□□ -0.08
Smc1bQ920F6 AC069562.3-201ENSMUST00000225387 587 ntBASIC14.53□□□□□ -0.08
Smc1bQ920F6 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Smc1bQ920F6 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.52□□□□□ -0.08
Smc1bQ920F6 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.52□□□□□ -0.08
Smc1bQ920F6 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Smc1bQ920F6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.52□□□□□ -0.08
Smc1bQ920F6 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Smc1bQ920F6 Gm14208-201ENSMUST00000119645 678 ntBASIC14.52□□□□□ -0.09
Smc1bQ920F6 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.52□□□□□ -0.09
Smc1bQ920F6 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.52□□□□□ -0.09
Smc1bQ920F6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Paupar-201ENSMUST00000194826 3482 ntBASIC14.52□□□□□ -0.09
Smc1bQ920F6 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Smc1bQ920F6 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Smc1bQ920F6 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Smc1bQ920F6 Gm11531-201ENSMUST00000117614 555 ntBASIC14.51□□□□□ -0.09
Smc1bQ920F6 Gm12616-201ENSMUST00000118594 382 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms