Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdhb3Q91XZ7 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
Pcdhb3Q91XZ7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdhb3Q91XZ7 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Gm43908-201ENSMUST00000205074 1472 ntBASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Gm9115-201ENSMUST00000120192 1348 ntBASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdhb3Q91XZ7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm12091-201ENSMUST00000146791 830 ntBASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm10297-201ENSMUST00000207136 651 ntBASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdhb3Q91XZ7 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Gm2128-201ENSMUST00000108009 2560 ntBASIC12.71□□□□□ -0.37
Pcdhb3Q91XZ7 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms