Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Gm23931-201ENSMUST00000103842 109 ntBASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Mir1247-201ENSMUST00000116706 82 ntBASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Pcdhga4Q91XY4 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm14921-201ENSMUST00000118643 908 ntBASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm7399-201ENSMUST00000032395 858 ntBASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.4□□□□□ -0.42
Pcdhga4Q91XY4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.43
Pcdhga4Q91XY4 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga4Q91XY4 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga4Q91XY4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga4Q91XY4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga4Q91XY4 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhga4Q91XY4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhga4Q91XY4 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms