Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
H1fooQ8VIK3 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Snord83b-201ENSMUST00000104546 94 ntBASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC10.53□□□□□ -0.72
H1fooQ8VIK3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.53□□□□□ -0.72
H1fooQ8VIK3 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
H1fooQ8VIK3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
H1fooQ8VIK3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
H1fooQ8VIK3 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
H1fooQ8VIK3 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
H1fooQ8VIK3 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
H1fooQ8VIK3 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Gm13615-201ENSMUST00000120242 1612 ntBASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC10.52□□□□□ -0.73
H1fooQ8VIK3 AC169036.1-201ENSMUST00000227994 296 ntBASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Zscan30-202ENSMUST00000224144 1458 ntBASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
H1fooQ8VIK3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC10.52□□□□□ -0.73
H1fooQ8VIK3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Gm44758-201ENSMUST00000206096 2068 ntBASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
H1fooQ8VIK3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms